Functionally Equivalent or Not? Graph-Grounded Differential Surrogate Execution for Code Equivalence

Determining whether two programs are functionally equivalent is central to code modernization, patch validation, refactoring, and code-generation evaluation. Yet the usual signals are incomplete: tests cover only finite inputs, textual similarity confuses implementation with behavior, and unconstrained LLM judgments are difficult to audit. Direct execution is often impossible when a program depends on an obsolete, licensed, unavailable, or unsafe environment. We introduce FEAgent, a selective equivalence assessor agent that combines typed program-graph evidence with differential surrogate execution. FEAgent first aligns public interfaces and behaviorally relevant graph anchors, then issues bounded queries over call-flow, control-flow, data-flow, type, import, and effect relations. Next, a branch-aware generator agent proposes discriminating inputs, and two blinded LLM surrogates independently predict source and target observables. Every claim and predicted divergence is recorded in an evidence ledger. A deterministic reconciler then returns EQUIVALENT, INEQUIVALENT, or UNCLEAR rather than forcing a verdict when paths are uncovered or evidence conflicts. We evaluate FEAgent on function-level equivalence and repository-level bug patches, where the existing oracle is a benchmark label or a passing test suite. Every disagreement with that oracle is adjudicated by direct execution, revealing errors in benchmark labels and behavioral divergences missed by unit-test-only scoring. On EquiBench, execution confirms FEAgent's disagreements with published labels on 216 of 1,200 evaluated pairs (18.0%); on SWE-bench Verified, 94 of 331 test-passing agent patches (28.4%) diverge from the reference patch. FEAgent thus serves as an audit layer between testing and formal verification, keeping its evidence reviewable and its uncertainty explicit without claiming a proof of equivalence.