Multi-Scale Temporal Flows for Peptide Trajectory Generation
q-bio.BM, q-bio.QM
Submitted: 2026-10-01
Updated: 2026-10-01
License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
Terminology
Sources
- EquiJump: Protein Dynamics Simulation via SO(3)-Equivariant Stochastic Interpolants
- Accurate and Efficient Structural Ensemble Generation of Macrocyclic Peptides using Internal Coordinate Diffusion
- Time2Vec: Learning a Vector Representation of Time
- Atomic Trajectory Modeling with State Space Models for Biomolecular Dynamics
- Scalable Spatio-Temporal SE(3) Diffusion for Long-Horizon Protein Dynamics
- MuCO: Generative Peptide Cyclization Empowered by Multi-stage Conformation Optimization
- Force-Guided Bridge Matching for Full-Atom Time-Coarsened Dynamics of Peptides
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