Covariance Eigenspace Provides Latent Attribution of Longitudinal Effects in Brain Age Gap
q-bio.QM, eess.SP
Submitted: 2026-09-30
Updated: 2026-09-30
Project page: https://atri-biostats.github.io/ADNIMERGE2
License: http://creativecommons.org/licenses/by/4.0/
The gist: Brain age gap is a promising machine learning (ML)-driven bio-marker of accelerated biological aging and is derived from neuroimaging data.
Terminology
Abstract
Brain age gap is a promising machine learning (ML)-driven bio-marker of accelerated biological aging and is derived from neuroimaging data. Recent works on coVariance neural networks (VNN) for brain age gap prediction have provided an explainable and anatomically verifiable framework for brain age gap prediction. Notably, VNN outcomes are derived by filtering inputs along covariance eigenvectors, providing a mechanism for explaining their decisions in terms of latent (orthogonal) vectors. In this paper, we investigate the longitudinal brain age gap effects in a Mild Cognitive Impairment (MCI) cohort using a VNN-driven brain age gap prediction framework. Specifically, using Integrated Gradients (IG) as the attribution mechanism, our results demonstrate that the eigenspectrum of the anatomical covariance matrix explains the different longitudinal effects observed in brain age gap in amyloid positive vs amyloid negative subcohorts more prominently than individual brain regions (83.2% with the leading eigenvector versus a maximal value of 7.7% for any brain region). Therefore, the covariance-based latent explanation identifies a key coordinated input pattern that carries most of the observed longitudinal effect in brain age gap.
Sources
- Generalized SHAP: Generating multiple types of explanations in machine learning
- Integrated Gradient Correlation: a Dataset-wise Attribution Method
- Towards Visually Explaining Statistical Tests with Applications in Biomedical Imaging
Related papers
- A likelihood-based framework for simultaneously learning both noise and growth dynamics using biologically-informed neural networks
- Automated Lesion Segmentation of Stroke MRI Using nnU-Net: A Comprehensive External Validation Across Acute and Chronic Lesions
- Imaging-anchored multiomics in cardiovascular disease: integrating cardiac imaging, bulk, single-cell, and spatial transcriptomics
- Resolving satellite-in situ mismatches in Net Primary Production using high-frequency in situ bio-optical observations in the subpolar Northwest Atlantic
- easyplater: The easy way to generate microplate designs deconvolved from multivariate clinical data
- Essential Workers at Risk: An Agent-Based Model (SAFE-ABM) with Bayesian Uncertainty Quantification