Right Answer, Wrong Reason: Accuracy, Consistency, and Consensus Are Misleading Indicators of LLM Faithfulness in Clinical Decision Support

arXiv:2609.32817 · cs.AI · Submitted 2026-09-26 · Read on arXiv

cs.AI

Submitted: 2026-09-26

Updated: 2026-10-10

Comments: Accepted and received best paper award from ICETCI 2026 Conference, https://ietcint.com/

License: http://creativecommons.org/licenses/by/4.0/

The gist: Clinical Large Language Models (LLMs) achieve strong medical-exam accuracy; however, a correct answer does not guarantee that the explanation names the concepts that actually drove the decision.

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Abstract

Clinical Large Language Models (LLMs) achieve strong medical-exam accuracy; however, a correct answer does not guarantee that the explanation names the concepts that actually drove the decision. We introduce three lightweight, directly interpretable metrics for this faithfulness gap: the Explanation Stability Index (ESI), which measures reasoning consistency across repeated queries; the Causal Faithfulness Score (CFS), which tests whether cited concepts drive predictions via concept ablation; and the Perturbation Stability Score (PSS), which measures robustness to semantic-preserving paraphrases. By evaluating six LLMs on 150 MedQA-USMLE questions (900 model-question observations), we found that only 23.3% of the cited clinical concepts were causally necessary. Correct answers had lower CFS than incorrect answers (0.212 vs. 0.398), answer consistency negatively predicted CFS (Spearman r = -0.466), and model pairs could agree on answers while sharing only 8.8% of cited reasoning concepts. These results show that accuracy, consistency, and consensus are incomplete safety signals for clinical decision-making support. The evidence is behavioral rather than mechanistic: concept ablation tests counterfactual sensitivity of outputs, not internal circuits.

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