ANCHOR-RE: An Agentic Biomedical Relation Extraction Framework with Retrieval Augmentation and Error-Driven Verification

arXiv:2608.03154 · cs.CL · Submitted 2026-08-04 · Read on arXiv

cs.CL

Submitted: 2026-08-04

Updated: 2026-10-14

Comments: Submitted to Journal of Biomedical Informatics (under review)

Code: https://github.com/COMBINI-Hub/Multi_Agent_Relation_Extraction

License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/

Terminology

Verification — 50× in this paper · explained in 2 episodes
Benchmark — 27× in this paper · explained in 2 episodes
Verifier — 27× in this paper · explained in 2 episodes
Grounding — 18× in this paper · explained in 3 episodes
Fine-Tuning — 14× in this paper · explained in 5 episodes
Ontology — 7× in this paper · explained in 2 episodes
Generalizability — 6× in this paper · explained in 6 episodes
Knowledge Graph — 6× in this paper · explained in 8 episodes
Hallucination — 5× in this paper · explained in 4 episodes
Generalization — 4× in this paper · explained in 14 episodes
Graph Construction — 4× in this paper · explained in 3 episodes
Transformer — 4× in this paper · explained in 2 episodes
Augmentation — 3× in this paper · explained in 2 episodes
Evaluation Protocol — 3× in this paper · explained in 2 episodes
Language Models (LLMs) — 3× in this paper · explained in 2 episodes
Large Language Models (LLMs) — 3× in this paper · explained in 9 episodes
Neuro-symbolic Framework — 3× in this paper · explained in 2 episodes
Benchmarking — 2× in this paper · explained in 4 episodes
Computational Biology — 2× in this paper · explained in 2 episodes
Interpretability — 2× in this paper · explained in 15 episodes
Knowledge Base Construction — 2× in this paper · explained in 2 episodes
Prompt Engineering — 2× in this paper · explained in 6 episodes
Robustness — 2× in this paper · explained in 6 episodes
Ablation — 1× in this paper · explained in 1 episode
Ablation Studies — 1× in this paper · explained in 1 episode
Accuracy — 1× in this paper · explained in 1 episode
Agentic Framework — 1× in this paper · explained in 7 episodes
Calibration — 1× in this paper · explained in 9 episodes
Comparative Toxicogenomics Database — 1× in this paper
Computational Efficiency — 1× in this paper · explained in 2 episodes
Contrastive Learning — 1× in this paper · explained in 9 episodes
Core — 1× in this paper · explained in 2 episodes
Cosine Similarity — 1× in this paper · explained in 3 episodes
Embeddings — 1× in this paper · explained in 2 episodes
Ensemble Learning — 1× in this paper · explained in 2 episodes
Instruction Tuning — 1× in this paper · explained in 3 episodes
Iterative Refinement — 1× in this paper · explained in 5 episodes
Knowledge graphs — 1× in this paper · explained in 2 episodes
National Center for Complementary and Integrative Health — 1× in this paper
Neuro-symbolic approach — 1× in this paper · explained in 5 episodes
Papers — 1× in this paper · explained in 3 episodes
Pruning — 1× in this paper · explained in 4 episodes
RAG — 1× in this paper · explained in 3 episodes
Training-Free Framework — 1× in this paper · explained in 2 episodes
Transformer Model — 1× in this paper · explained in 2 episodes
Transformer Models — 1× in this paper · explained in 3 episodes

Sources

Hallucination-Resistant Relation Extraction via Dependency-Aware Sentence Simplification and Two-tiered Hierarchical Refinement

Terminology

Sources

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