Competition between transient oscillations and early stochasticity in exponentially growing populations
q-bio.PE, physics.bio-ph
Submitted: 2023-10-30
Updated: 2024-08-01
Journal ref: Phys. Rev. Research 6, 033320 (2024)
DOI: 10.1103/PhysRevResearch.6.033320
Code: https://github.com/Ywrhein/population-stochasticitysimulation
License: http://creativecommons.org/licenses/by/4.0/
The gist: It has been recently shown that the exponential growth rate of a population of bacterial cells starting from a single cell shows transient oscillations due to early synchronized bursts of division.
Terminology
Abstract
It has been recently shown that the exponential growth rate of a population of bacterial cells starting from a single cell shows transient oscillations due to early synchronized bursts of division. These oscillations are enhanced by cell size regulation and contain information about single-cell growth statistics. Here, we report a phase transition in these oscillations as a function of growth rate variability. Below the transition point, these oscillations become asymptotically deterministic and can be measured experimentally, while above the transition point, the stochasticity in population growth dominates the oscillations and masks all the information about single cell growth statistics. The analytically calculated transition point, which roughly corresponds to 13% variability in single-cell growth rate, falls within physiologically relevant parameters. Additionally, we show that the oscillations can stochastically emerge even when the initial state contains multiple cells with out-of-phase division cycles. We show that the amplitude and the phase of these oscillations are stochastic and would vary across repeated measurements with the same initial conditions. We provide analytic expressions as well as numerical estimates for the typical oscillation amplitude and the number of generations before the amplitude falls below a given measurement threshold for E. coli in multiple growth conditions.
Sources
- Analytical cell size distribution: lineage-population bias and parameter inference
- Asymptotic decoupling of population growth rate and cell size distribution
Related papers
- Drivers of periodicity in population dynamic models of long-lived, large mammals
- How deterministic trajectories and their fluctuations underlie allele-frequency statistics in the strong-selection regime
- Constraints on the perfect phylogeny mixture model and their effect on reducing degeneracy
- Spatiotemporal noise stabilizes unbounded diversity in strongly-competitive communities
- Interplay between evolutionary and epidemic time scales challenges the outcome of control policies
- Evolutionary foraging in grids: Intermittent search dynamics emerge in finite, depletable landscapes